Voltage (ΔΨ) across the inner mitochondrial membrane (IMM) controls a variety of mitochondrial function including ATP synthesis, thermogenesis, and cell death. Thus, maintenance of ΔΨ and stability of its magnitude are of a paramount significance for the physiology of the cell and the entire organism. Currently, the electron transport chain remains the only well-established mechanism for the ΔΨ maintenance. Here, we identify mitochondrial Cl channels as a crucial mechanism for the ΔΨ maintenance. We use the whole-IMM patch-clamp analysis, and demonstrate that mitochondria possess two distinct types of voltage-gated Cl channels (ClV), inactivating ClV activated at hyperpolarized voltage (hClV) and non-inactivating ClV activated at depolarized voltage (dClV). hClV is characterized by low activation threshold just below the physiological ΔΨ values and has fast inactivation. hClV is a novel mitochondrial Cl channel that has never been reported previously. In contrast, dClV activated only by profound membrane depolarization to ~ 0 mV and is completely lacking inactivation. dClV likely corresponds to the inner membrane anion channel or the 108-pS anion channel, but its detailed electrophysiological analysis was missing. Using optical methods and mitochondrial respiration assays, we demonstrate that mitochondrial Cl channels largely ameliorate ΔΨ depolarization induced by mitochondrial uncouplers (H+ leak) and Ca2+ uptake via the mitochondrial Ca2+ uniporter. Importantly, mitochondrial Cl channels profoundly delay the activation of mitochondrial permeability transition pore. Thus, hClV and dClV represent a previously unknown mechanism for ΔΨ maintenance, which could play a fundamental role in preserving mitochondrial integrity and function.